PPDB

The Plant Proteome Database

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AT5G20270.1   heptahelical transmembrane protein1

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30850.1 11Arabidopsis thaliana1E-9734343580 (0)_
AT4G30850.2 11Arabidopsis thaliana1E-9734343580 (0)_
AT2G24150.1 11Arabidopsis thaliana9E-9531844600 (0)_
Os06g43620.1 7Oryza sativa1E-10032850640 (0)_
Os06g44250.1 7Oryza sativa3E-8731144570 (0)C
Os03g10300.1 7Oryza sativa6E-8435739530 (0)_
GRMZM2G169321_P01 3.21Zea mays2E-11432951640 (0)_
Zm00001eb275250_P001 agpv5Zea mays2E-11432951640 (0)_
v1_GRMZM2G169321_P01 4a53Zea mays2E-11432951640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HlyIII(1) Phage_holin_2_3(2) TSGP1(1)
TargetP: Cytoplasm (Class 2 C0.244; M0.058; S0.149; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 332 aa (-cTP 292)
Molecular Weight 37.88 kDA(-cTP )
PI 8.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help