PPDB

The Plant Proteome Database

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AT5G20200.1   nucleoporin-like protein

Lab Annot. nucleoporin-related
Mapman: 29.3.1 protein.targeting.nucleus
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10650.1 11Arabidopsis thaliana2E-1947027421 (1)_
AT3G10650.2 11Arabidopsis thaliana2E-1947027420 (0)_
Os06g40460.1 7Oryza sativa1E-0947125390 (0)_
GRMZM2G329300_P01 3.21Zea mays1E-1428128429 (9)M
v1_GRMZM2G329300_P01 4a53Zea mays1E-14281284227 (27)M
Zm00001eb060090_P001 agpv5Zea mays1E-1328127410 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 4 C0.756; M0.120; S0.007; _0.427)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 762 aa (-cTP 732) (-lTP 674)
Molecular Weight 81.68 kDA(-cTP 78.75)(-lTP 72.31)
PI 9.30(-cTP 9.23)(-lTP 8.715)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help