PPDB

The Plant Proteome Database

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AT5G20130.1   sulfate adenylyltransferase subunit

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20130.2 11Arabidopsis thaliana2E-1452021001000 (0)M
Os09g39474.1 7Oryza sativa1E-1517932492 (2)C
Zm00001eb308290_P005 agpv5Zea mays8E-2017440550 (0)M
Zm00001eb308290_P002 agpv5Zea mays9E-1617835520 (0)_
GRMZM2G312075_P01 3.21Zea mays4E-1516038540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 5 C0.691; M0.557; S0.017; _0.021)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 202 aa (-cTP 141)
Molecular Weight 21.95 kDA(-cTP 15.14)
PI 9.59(-cTP 9.10)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help