PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G20070.1   nudix hydrolase homolog 19

Lab Annot. pyrophosphohydrolase NADH and NADPH (ATNUDX19) - plastid/peroxisome?
Mapman: 26.13 misc.acid and other phosphatases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g04910.1 7Oryza sativa2E-16740360732 (2)M
Zm00001eb377430_P001 agpv5Zea mays1E-17139561760 (0)M
v1_GRMZM2G404897_P04 4a53Zea mays2E-16639661760 (0)_
GRMZM2G404897_P04 3.21Zea mays2E-16639661760 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NUDIX(1) NUDIX-like(1) Stirrup(1) zf-NADH-PPase(1)
TargetP: Chloroplast (Class 4 C0.470; M0.240; S0.046; _0.008)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 438 aa (-cTP 402) (-lTP 372)
Molecular Weight 48.35 kDA(-cTP 44.47)(-lTP 41.32)
PI 5.70(-cTP 5.50)(-lTP 5.201)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help