PPDB

PPDB	The Plant Proteome Database

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AT5G20060.1 alpha/beta-Hydrolases superfamily protein

Lab Annot.

Phospholipase/Carboxylesterase (S9 E>0.1)
Mapman: 11.9.3.2 lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase; 26.57* misc.alpha/beta-Hydrolase family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G20060.4 11 Arabidopsis thaliana 0 252 100 100 0 (0) _
AT5G20060.3 11 Arabidopsis thaliana 0 252 100 100 3 (3) _
AT5G20060.2 11 Arabidopsis thaliana 0 252 100 100 3 (3) _
Os01g07960.1 7 Oryza sativa 2E-132 248 69 84 20 (20) _
Os01g07960.3 7 Oryza sativa 2E-132 248 69 84 20 (20) _
Os01g07960.2 7 Oryza sativa 2E-132 248 69 84 20 (20) _
GRMZM2G080521_P03 3.21 Zea mays 5E-133 237 71 86 0 (0) _
Zm00001eb336850_P001 agpv5 Zea mays 5E-133 237 71 86 0 (0) _
v1_GRMZM2G080521_P03 4a53 Zea mays 5E-133 237 71 86 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_2(1) Abhydrolase_6(1) DLH(1) FSH1(1) Hydrolase_4(3) LIP(2) Peptidase
TargetP:	Cytoplasm (Class 5 C0.132; M0.290; S0.041; _0.454)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	252 aa (-cTP 248)
Molecular Weight	26.73 kDA(-cTP )
PI	6.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
420	Detail								leaf [A. thaliana]	chloroplast stroma	clpR1-stop (EMS)
1458	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 1)
1870	Detail								Total leaf [A. thaliana]	Stroma	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data