PPDB

 The Plant Proteome Database

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AT5G20040.1   isopentenyltransferase 9
Lab Annot. IPT9 - tRNA isopentenyltransferase
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20040.3 11Arabidopsis thaliana046998985 (3)M
AT5G20040.2 11Arabidopsis thaliana046399995 (3)M
AT1G68460.1 11Arabidopsis thaliana2E-2212538650 (0)C
Os06g51350.1 7Oryza sativa8E-16740060730 (0)M
Os05g24660.1 7Oryza sativa5E-2511444640 (0)_
Os01g73760.1 7Oryza sativa1E-2318334570 (0)_
Zm00001eb271810_P003 agpv5Zea mays3E-16142956700 (0)M
GRMZM2G102915_P01 3.21Zea mays3E-16142956700 (0)M
v1_GRMZM2G102915_P01 4a53Zea mays3E-16142956700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_25(1) AAA_28(1) AAA_33(1) AAA
TargetP: Mitochondria (Class 2 C0.087; M0.747; S0.035; _0.025)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 463 aa (-cTP 434)
Molecular Weight 52.26 kDA(-cTP )
PI 7.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(80S polysomal fraction)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help