PPDB

 The Plant Proteome Database

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AT5G19980.1   golgi nucleotide sugar transporter 4
Lab Annot. golgi nucleotide sugar transporter 4
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76340.1 11Arabidopsis thaliana3E-9933249650 (0)_
AT4G31600.1 11Arabidopsis thaliana3E-1131425430 (0)_
AT4G31600.2 11Arabidopsis thaliana2E-1021726430 (0)_
Os08g10350.1 7Oryza sativa1E-16333370790 (0)S
Os09g14520.1 7Oryza sativa7E-16233470780 (0)S
Os03g11590.5 7Oryza sativa3E-10732652660 (0)_
Zm00001eb198210_P002 agpv5Zea mays1E-16033071790 (0)S
Zm00001eb198210_P001 agpv5Zea mays1E-16033071790 (0)S
v1_GRMZM2G058120_P01 4a53Zea mays1E-16033071793 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: EamA(3) TPT(1)
TargetP: Secreted (Class 5 C0.004; M0.084; S0.695; _0.515)
Predotar:
Subcel. Location:
TM-HMM prediction: 9 TMs
Aramemnon: 10 TMs
TAT position:
Length 341 aa (-cTP 317)
Molecular Weight 37.39 kDA(-cTP )
PI 6.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
22430844(Golgi-cell-culture)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help