PPDB

PPDB	The Plant Proteome Database

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AT5G19960.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19960.2 11 Arabidopsis thaliana 0 249 100 100 0 (0) _
AT4G39260.3 11 Arabidopsis thaliana 3E-15 79 44 68 177 (137) _
AT4G39260.2 11 Arabidopsis thaliana 2E-13 73 45 69 176 (136) _
Os02g11750.1 7 Oryza sativa 2E-35 339 34 52 0 (0) _
Os12g43600.1 7 Oryza sativa 8E-13 78 41 64 44 (44) _
Os03g46770.1 7 Oryza sativa 1E-12 75 44 64 35 (35) _
Zm00001eb240430_P001 agpv5 Zea mays 1E-51 330 38 56 0 (0) _
v1_GRMZM2G057642_P03 4a53 Zea mays 1E-51 330 38 56 29 (29) _
GRMZM2G057642_P03 3.21 Zea mays 1E-51 330 38 56 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATG16(1) EzrA(1) GAS(1) GED(1) Nup188_C(1) RRM_1(1) RRM_5(1) RRM_7(1)
TargetP:	Cytoplasm (Class 2 C0.059; M0.182; S0.049; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	337 aa (-cTP 284)
Molecular Weight	38.68 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data