PPDB

 The Plant Proteome Database

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AT5G19930.1   integral membrane protein (Protein of unknown function DUF92%2C transmembrane)
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19930.2 11Arabidopsis thaliana02881001000 (0)S
Os01g32280.1 7Oryza sativa1E-12326168820 (0)S
Os01g08290.1 7Oryza sativa8E-11023568840 (0)_
v1_GRMZM2G163307_P01 4a53Zea mays7E-12627464820 (0)C
Zm00001eb106640_P001 agpv5Zea mays7E-12627464820 (0)C
GRMZM2G163307_P01 3.21Zea mays7E-12627464820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF456(3) DUF92(1) Ni_hydr_CYTB(1) Saf_2TM(2) Syndecan(3)
TargetP: Secreted (Class 3 C0.010; M0.054; S0.797; _0.295)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 7 TMs
TAT position:
Length 288 aa (-cTP 227)
Molecular Weight 30.52 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help