PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G19870.1   transmembrane epididymal protein (DUF716)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55230.1 11Arabidopsis thaliana9E-12427862776 (6)S
AT1G55240.1 11Arabidopsis thaliana4E-11827958770 (0)S
AT1G49470.1 11Arabidopsis thaliana1E-4626338530 (0)S
Os09g27260.1 7Oryza sativa3E-9526953710 (0)M
Os08g36030.1 7Oryza sativa3E-9427551670 (0)M
Os09g27250.1 7Oryza sativa5E-8725647660 (0)_
v1_GRMZM2G429617_P01 4a53Zea mays2E-9226952690 (0)M
GRMZM2G429617_P01 3.21Zea mays2E-9226952690 (0)M
Zm00001eb314330_P001 agpv5Zea mays2E-9226952690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF716(1)
TargetP: Secreted (Class 2 C0.008; M0.098; S0.893; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 276 aa (-cTP 210)
Molecular Weight 31.64 kDA(-cTP )
PI 8.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help