PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G19840.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
Mapman: 35.1.17 not assigned.no ontology.transcription factor jumonji (jmjC) domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19840.2 11Arabidopsis thaliana053293930 (0)_
AT3G20810.2 11Arabidopsis thaliana6E-22271294424 (6)_
AT3G20810.1 11Arabidopsis thaliana6E-22271294429 (10)_
Os01g56640.3 7Oryza sativa1E-17252948660 (0)_
Os01g56640.1 7Oryza sativa4E-15552845620 (0)_
Os01g56640.2 7Oryza sativa1E-3017441510 (0)_
GRMZM2G079468_P02 3.21Zea mays8E-17253049640 (0)_
Zm00001eb370120_P002 agpv5Zea mays8E-17253049640 (0)_
GRMZM2G079468_P01 3.21Zea mays7E-17053049640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_2(2) Cupin_4(1) Cupin_8(2) JmjC(1)
TargetP: Cytoplasm (Class 2 C0.069; M0.043; S0.218; _0.845)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 533 aa (-cTP 515)
Molecular Weight 60.04 kDA(-cTP )
PI 5.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help