PPDB

The Plant Proteome Database

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AT5G19730.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
TAIR curated location: cell wall & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47500.1 11Arabidopsis thaliana4E-9937641560 (0)S
AT2G36710.1 11Arabidopsis thaliana6E-9929448680 (0)S
AT1G05310.1 11Arabidopsis thaliana4E-9729747670 (0)S
Os01g53990.1 7Oryza sativa035969830 (0)S
Os05g44600.1 7Oryza sativa035869800 (0)S
Os01g53990.2 7Oryza sativa1E-15731167810 (0)S
v1_GRMZM2G177940_P01 4a53Zea mays038863770 (0)M
Zm00001eb153600_P001 agpv5Zea mays038863770 (0)M
GRMZM2G177940_P01 3.21Zea mays038863770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1)
TargetP: Secreted (Class 2 C0.004; M0.180; S0.934; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 383 aa (-cTP 345)
Molecular Weight 42.54 kDA(-cTP )
PI 9.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help