PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G19680.1   Leucine-rich repeat (LRR) family protein

Lab Annot.
Mapman: 29.4 protein.postranslational modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22320.2 11Arabidopsis thaliana3E-0913930550 (0)_
AT5G22320.1 11Arabidopsis thaliana3E-0913930550 (0)_
AT1G78230.1 11Arabidopsis thaliana2E-0715031460 (0)S
Os02g13640.1 7Oryza sativa5E-15731467821 (1)_
Os01g73560.1 7Oryza sativa7E-1324029520 (0)M
Os06g45630.1 7Oryza sativa3E-0927030430 (0)S
Zm00001eb204970_P001 agpv5Zea mays7E-16230970830 (0)_
v1_GRMZM2G109731_P01 4a53Zea mays7E-16230970832 (2)_
GRMZM2G109731_P01 3.21Zea mays7E-16230970832 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(10) LRR_4(7) LRR_6(10) LRR_8(8) LRR_9(3)
TargetP: Cytoplasm (Class 2 C0.163; M0.070; S0.034; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 328 aa (-cTP 326)
Molecular Weight 36.98 kDA(-cTP )
PI 4.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
17216043(leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help