PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G19490.1   Histone superfamily protein

Lab Annot. Histone protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12480.1 11Arabidopsis thaliana3E-4613456731 (0)_
AT5G50490.1 11Arabidopsis thaliana2E-099536510 (0)_
AT5G27910.1 11Arabidopsis thaliana2E-087439550 (0)_
Os05g41450.1 7Oryza sativa1E-4923846570 (0)_
Os11g34200.1 7Oryza sativa4E-4512558792 (2)_
Os03g14669.2 7Oryza sativa1E-077935554 (4)_
GRMZM2G440949_P01 3.21Zea mays7E-4713260750 (0)_
v1_GRMZM2G440949_P01 4a53Zea mays7E-4713260750 (0)_
Zm00001eb291470_P001 agpv5Zea mays7E-4713260750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) Histone(2)
TargetP: Cytoplasm (Class 5 C0.056; M0.503; S0.042; _0.691)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 264 aa (-cTP 254)
Molecular Weight 29.56 kDA(-cTP )
PI 5.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help