PPDB

PPDB	The Plant Proteome Database

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AT5G19430.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19430.6 11 Arabidopsis thaliana 0 255 100 100 0 (0) _
AT5G19430.2 11 Arabidopsis thaliana 3E-175 231 99 100 0 (0) _
AT5G19430.5 11 Arabidopsis thaliana 2E-148 249 94 96 0 (0) S
Os01g72480.1 7 Oryza sativa 3E-69 221 57 68 0 (0) C
Zm00001eb140640_P001 agpv5 Zea mays 2E-58 222 52 64 0 (0) C
v1_GRMZM2G168707_P01 4a53 Zea mays 1E-55 222 51 63 0 (0) C
GRMZM2G168707_P01 3.21 Zea mays 1E-55 222 51 63 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1272(1) Hepatitis_core(1) PRR22(1) SR-25(1) VCX_VCY(1) zf-ANAPC11(1) zf-C3HC4
TargetP:	Cytoplasm (Class 3 C0.143; M0.105; S0.124; _0.724)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	255 aa (-cTP 246)
Molecular Weight	28.40 kDA(-cTP )
PI	5.70(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data