PPDB

PPDB	The Plant Proteome Database

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AT5G19350.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding protein 45 (RBP45), putative
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19350.2 11 Arabidopsis thaliana 0 425 99 99 2 (1) _
AT1G11650.2 11 Arabidopsis thaliana 7E-115 332 53 66 111 (51) _
AT5G54900.1 11 Arabidopsis thaliana 1E-114 341 52 67 4 (3) M
Os03g07800.1 7 Oryza sativa 0 415 66 75 4 (4) _
Os03g37270.2 6 Oryza sativa 2E-125 343 57 69 11 (11) _
Os03g37270.1 7 Oryza sativa 3E-125 343 57 69 22 (22) _
Zm00001eb005630_P001 agpv5 Zea mays 0 416 66 76 0 (0) _
v1_GRMZM2G142557_P01 4a53 Zea mays 0 416 66 76 1 (1) _
GRMZM2G142557_P01 3.21 Zea mays 0 416 66 76 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1866(1) DUF4078(1) PHM7_cyt(3) RRM_1(3) RRM_3(1) RRM_5(3) RRM_7(3) SET_assoc(
TargetP:	Cytoplasm (Class 3 C0.089; M0.320; S0.041; _0.735)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	425 aa (-cTP 423)
Molecular Weight	46.60 kDA(-cTP )
PI	5.47(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data