PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G19320.1   RAN GTPase activating protein 2

Lab Annot. RAN GTPase activating protein 2
Mapman: 30.5 signalling.G-proteins
Curated Location
TAIR curated location: nuclear envelope0012061901
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19320.2 11Arabidopsis thaliana05451001000 (0)_
AT3G63130.1 11Arabidopsis thaliana0499627930 (24)C
AT3G63130.2 11Arabidopsis thaliana0499627929 (23)C
Os05g46560.1 7Oryza sativa0543627946 (46)_
Os05g46560.2 7Oryza sativa0543627946 (46)_
Os05g33870.1 7Oryza sativa2E-3719642630 (0)_
Zm00001eb247310_P001 agpv5Zea mays051262780 (0)_
Zm00001eb184850_P001 agpv5Zea mays050561770 (0)C
v1_GRMZM2G079817_P01 4a53Zea mays0505617737 (37)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(5) LRR_4(6) LRR_6(9) LRR_8(5) Mif2_N(1) WPP(1)
TargetP: Cytoplasm (Class 5 C0.380; M0.085; S0.103; _0.542)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 545 aa (-cTP 525)
Molecular Weight 59.65 kDA(-cTP )
PI 4.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
16618929(ER-LOPIT-callus)
17151019(vacuole - suspension cell)
17916636(root (NaCl stress))
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help