PPDB

 The Plant Proteome Database

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AT5G19250.1   Glycoprotein membrane precursor GPI-anchored
Lab Annot. Glycoprotein membrane precursor GPI-anchored
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06035.1 11Arabidopsis thaliana6E-8220266778 (8)S
AT5G19230.1 11Arabidopsis thaliana7E-7118464713 (3)S
AT5G19230.2 11Arabidopsis thaliana7E-7118464710 (0)S
Os07g45060.1 7Oryza sativa5E-57194476512 (12)S
Zm00001eb110400_P001 agpv5Zea mays9E-5516552690 (0)S
GRMZM2G322618_P01 3.21Zea mays9E-5516552690 (0)S
v1_GRMZM2G322618_P01 4a53Zea mays9E-5516552690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SCP(1)
TargetP: Secreted (Class 1 C0.002; M0.016; S0.956; _0.110)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 196 aa (-cTP 173)
Molecular Weight 21.03 kDA(-cTP )
PI 4.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1874Detail       Total leaf [A. thaliana] total soluble wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2046Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2052Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2081Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

 12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

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