PPDB

The Plant Proteome Database

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AT5G19240.1   Glycoprotein membrane precursor GPI-anchored

Lab Annot. Glycoprotein membrane precursor GPI-anchored
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19230.1 11Arabidopsis thaliana1E-7518667753 (3)S
AT5G19230.2 11Arabidopsis thaliana1E-7518667750 (0)S
AT5G19250.1 11Arabidopsis thaliana5E-64169647343 (43)S
Os07g45060.1 7Oryza sativa1E-32166396112 (12)S
Zm00001eb110400_P001 agpv5Zea mays2E-3018537570 (0)S
GRMZM2G322618_P01 3.21Zea mays2E-3018537570 (0)S
v1_GRMZM2G322618_P01 4a53Zea mays2E-3018537570 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 1 C0.009; M0.028; S0.949; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 199 aa (-cTP 175)
Molecular Weight 21.34 kDA(-cTP )
PI 6.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2223Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to leaves)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help