PPDB

PPDB	The Plant Proteome Database

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AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DExD box RNA helicase (RH58) (VDL homologue)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

plastid (Pubmed: 23198870 11090214 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19210.1 11 Arabidopsis thaliana 0 315 100 100 0 (0) _
AT5G19210.3 11 Arabidopsis thaliana 0 315 100 100 0 (0) _
AT1G12770.2 11 Arabidopsis thaliana 9E-36 433 27 43 0 (0) M
Os01g73900.1 7 Oryza sativa 0 397 67 82 0 (0) C
Os03g12000.1 7 Oryza sativa 4E-36 433 26 43 18 (18) M
Os02g42406.1 7 Oryza sativa 2E-35 434 27 43 12 (12) M
Zm00001eb362300_P003 agpv5 Zea mays 0 398 65 81 0 (0) C
GRMZM2G415538_P01 3.21 Zea mays 1E-175 370 66 81 9 (9) _
Zm00001eb362300_P004 agpv5 Zea mays 1E-175 370 66 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) DEAD(1) DUF87(1) Helicase_C(1) RAMP(2) ResIII(1) SNF2_N(1) S
TargetP:	Chloroplast (Class 3 C0.678; M0.046; S0.135; _0.010)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	472 aa (-cTP 418)
Molecular Weight	52.81 kDA(-cTP 46.85)
PI	8.60(-cTP 7.02)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data