PPDB

The Plant Proteome Database

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AT5G19210.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot. DExD box RNA helicase (RH58) (VDL homologue)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location plastid (Pubmed: 23198870 11090214 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19210.2 11Arabidopsis thaliana03151001001 (1)C
AT5G19210.3 11Arabidopsis thaliana03151001000 (0)_
AT1G72730.1 11Arabidopsis thaliana4E-183202644400 (278)_
Os01g73900.1 7Oryza sativa1E-15831368810 (0)C
Os06g48750.3 7Oryza sativa2E-19315264462 (62)_
Os06g48750.1 7Oryza sativa2E-19315264479 (79)_
GRMZM2G415538_P01 3.21Zea mays1E-14531465819 (9)_
Zm00001eb362300_P004 agpv5Zea mays1E-14531465810 (0)_
v1_GRMZM2G415538_P01 4a53Zea mays1E-14531465811 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_22(1) DEAD(1) Helicase_C(1)
TargetP: Cytoplasm (Class 2 C0.024; M0.044; S0.219; _0.840)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 315 aa (-cTP 309)
Molecular Weight 35.46 kDA(-cTP )
PI 8.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help