PPDB

 The Plant Proteome Database

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AT5G19090.1   Heavy metal transport/detoxification superfamily protein
Lab Annot. HMA and proline rich domain
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19090.5 11Arabidopsis thaliana05871001000 (0)_
AT5G19090.4 11Arabidopsis thaliana05871001000 (0)_
AT5G19090.2 11Arabidopsis thaliana3E-902901001001 (1)_
Os11g05010.1 7Oryza sativa6E-3311560730 (0)_
Os11g05010.3 7Oryza sativa6E-3311560730 (0)_
Os11g05010.2 7Oryza sativa6E-3311560730 (0)_
v1_GRMZM2G022318_P04 4a53Zea mays5E-287669880 (0)_
v1_GRMZM2G022318_P02 4a53Zea mays5E-287669880 (0)_
v1_GRMZM2G022318_P01 4a53Zea mays5E-287669880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HMA(1)
TargetP: Cytoplasm (Class 2 C0.033; M0.105; S0.239; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 587 aa (-cTP 492)
Molecular Weight 59.62 kDA(-cTP )
PI 6.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help