PPDB

PPDB	The Plant Proteome Database

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AT5G19080.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G06140.1 11 Arabidopsis thaliana 2E-136 298 68 79 0 (0) M
AT3G09770.1 11 Arabidopsis thaliana 8E-84 267 48 64 0 (0) C
AT3G53410.1 11 Arabidopsis thaliana 2E-82 258 47 64 0 (0) _
Os05g33000.2 7 Oryza sativa 7E-93 254 55 71 0 (0) M
Os05g33000.1 7 Oryza sativa 7E-93 254 55 71 0 (0) M
Os10g13670.1 7 Oryza sativa 7E-84 255 48 65 0 (0) M
Zm00001eb287460_P001 agpv5 Zea mays 8E-90 258 56 70 0 (0) _
Zm00001eb398400_P001 agpv5 Zea mays 1E-84 257 49 67 0 (0) M
Zm00001eb398400_P002 agpv5 Zea mays 1E-84 257 49 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-P11(1) zf-RING_2(1) zf
TargetP:	Cytoplasm (Class 4 C0.062; M0.461; S0.015; _0.695)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	378 aa (-cTP 318)
Molecular Weight	42.31 kDA(-cTP )
PI	5.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data