PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G19030.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs)
Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19030.5 11 Arabidopsis thaliana 1E-101 143 98 99 0 (0) C
AT5G19030.2 11 Arabidopsis thaliana 5E-101 141 100 100 0 (0) C
AT5G19030.3 11 Arabidopsis thaliana 9E-71 105 100 100 0 (0) C
Os04g33810.1 7 Oryza sativa 2E-13 81 38 58 0 (0) M
Os03g17060.1 7 Oryza sativa 3E-13 126 34 55 0 (0) C
Os01g74340.1 7 Oryza sativa 5E-13 78 39 58 0 (0) M
v1_GRMZM2G470862_P01 4a53 Zea mays 1E-14 101 38 58 0 (0) M
GRMZM2G470862_P01 3.21 Zea mays 1E-14 101 38 58 1 (0) M
Zm00001eb364970_P002 agpv5 Zea mays 1E-14 101 38 58 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nup35_RRM(1) RRM_1(1) RRM_3(1) RRM_7(1) RRM_occluded(1)
TargetP:	Chloroplast (Class 5 C0.476; M0.329; S0.004; _0.025)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	172 aa (-cTP 114)
Molecular Weight	19.39 kDA(-cTP 12.76)
PI	10.19(-cTP 9.46)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data