PPDB

The Plant Proteome Database

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AT5G18990.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G24130.1 11Arabidopsis thaliana033383880 (0)S
AT2G47280.1 11Arabidopsis thaliana2E-9230846610 (0)S
AT5G26810.1 11Arabidopsis thaliana2E-8830446630 (0)S
Os01g19440.1 7Oryza sativa6E-8930745610 (0)S
Os03g19610.1 7Oryza sativa5E-6728740560 (0)M
Os07g46190.1 7Oryza sativa7E-6426243560 (0)M
GRMZM2G121278_P01 3.21Zea mays1E-8730345630 (0)M
v1_GRMZM2G121278_P01 4a53Zea mays1E-8730345630 (0)M
Zm00001eb340380_P001 agpv5Zea mays6E-7433440550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1)
TargetP: Secreted (Class 1 C0.004; M0.067; S0.957; _0.113)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 330 aa (-cTP 268)
Molecular Weight 36.46 kDA(-cTP )
PI 9.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help