PPDB

The Plant Proteome Database

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AT5G18900.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06300.1 11Arabidopsis thaliana029883924 (4)S
AT3G28480.1 11Arabidopsis thaliana9E-12627361750 (0)S
AT3G28490.1 11Arabidopsis thaliana3E-11526860760 (0)S
Os05g41010.1 7Oryza sativa5E-13627565790 (0)S
Os03g58890.2 7Oryza sativa1E-12527063780 (0)S
Os03g58890.1 7Oryza sativa9E-12327062780 (0)S
Zm00001eb291180_P004 agpv5Zea mays4E-13927067800 (0)S
GRMZM2G459063_P02 3.21Zea mays4E-13927067800 (0)S
v1_GRMZM2G459063_P02 4a53Zea mays4E-13927067800 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) 2OG-FeII_Oxy_3(1) ShK(1)
TargetP: Secreted (Class 2 C0.214; M0.025; S0.818; _0.001)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 298 aa (-cTP 232)
Molecular Weight 33.06 kDA(-cTP )
PI 6.71(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19546170(mature pollen grains)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help