PPDB

The Plant Proteome Database

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AT5G18810.1   SC35-like splicing factor 28

Lab Annot. SC35-like splicing factor 28
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
TAIR curated location: nuclear speck15133128
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18810.2 11Arabidopsis thaliana2E-1632341001000 (0)C
AT3G13570.1 11Arabidopsis thaliana2E-3426341495 (4)C
AT1G55310.5 11Arabidopsis thaliana2E-3313452640 (0)C
Os03g24890.2 7Oryza sativa1E-4619154650 (0)M
Os03g24890.1 7Oryza sativa3E-4415956660 (0)M
Os03g25770.1 7Oryza sativa1E-329061770 (0)M
Zm00001eb017780_P001 agpv5Zea mays3E-4410367830 (0)C
Zm00001eb017780_P002 agpv5Zea mays2E-4310367830 (0)C
Zm00001eb328450_P009 agpv5Zea mays5E-3521744520 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1)
TargetP: Chloroplast (Class 4 C0.598; M0.355; S0.020; _0.119)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 236 aa (-cTP 233)
Molecular Weight 28.03 kDA(-cTP 27.67)
PI 11.44(-cTP 11.41)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help