PPDB

PPDB	The Plant Proteome Database

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AT5G18780.1 F-box/RNI-like superfamily protein

Lab Annot.

F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G18780.2 11 Arabidopsis thaliana 0 441 100 100 0 (0) _
AT5G18780.4 11 Arabidopsis thaliana 0 347 100 100 0 (0) _
AT5G18780.3 11 Arabidopsis thaliana 0 347 100 100 0 (0) _
Os04g19750.1 7 Oryza sativa 8E-14 397 25 40 0 (0) M
Os10g03870.1 7 Oryza sativa 3E-13 374 26 39 0 (0) _
Os09g37570.1 7 Oryza sativa 3E-12 64 51 67 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) FBD(2) LRR_2(3)
TargetP:	Cytoplasm (Class 5 C0.142; M0.461; S0.022; _0.557)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	441 aa (-cTP 406)
Molecular Weight	50.22 kDA(-cTP )
PI	7.48(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data