PPDB

 The Plant Proteome Database

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AT5G18620.1   chromatin remodeling factor17
Lab Annot. chromatin remodeling factor17
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18620.2 11Arabidopsis thaliana0107299993 (3)_
AT3G06400.2 11Arabidopsis thaliana01063929611 (11)_
AT3G06400.1 11Arabidopsis thaliana01063929511 (11)_
Os01g27040.1 7Oryza sativa0101684934 (4)_
ChrUn.fgenesh.mRNA.85 7Oryza sativa0103083910 (0) 
Os05g05780.1 7Oryza sativa098185930 (0)_
AC235535.1_FGP001 3.21Zea mays093584915 (5)_
v1_AC235535.1_FGP001 4a53Zea mays0935849121 (21)_
Zm00001eb341650_P001 agpv5Zea mays090183910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_14(1) DBINO(3) DEAD(1) DUF1086(1) DUF1509(1) HAND(1) HDA2-3(1) Helicase_C(1)
TargetP: Cytoplasm (Class 2 C0.147; M0.115; S0.156; _0.817)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1069 aa (-cTP 1066)
Molecular Weight 123.89 kDA(-cTP )
PI 5.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1535Detail       leaf [A. thaliana] wild-type
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help