PPDB

 The Plant Proteome Database

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AT5G18570.1   GTP1/OBG family protein
Lab Annot. GTPase Obg A2 (OBG-A2) stroma and envelope
Mapman: 29.2.7* protein.synthesis.ribosome biogenesis
Curated Location envelope-inner (Pubmed: 23198870 20408996 22380942 25566271 )
plastid stroma (Pubmed: 23198870 20408996 22380942 25566272 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07615.1 11Arabidopsis thaliana4E-3627436501 (1)M
AT4G39520.1 11Arabidopsis thaliana9E-121872848116 (35)_
AT1G17470.2 11Arabidopsis thaliana1E-10114345539 (1)_
Os07g47300.1 7Oryza sativa0482708225 (25)C
Os03g58540.2 7Oryza sativa3E-50366375211 (11)C
Os03g58540.1 7Oryza sativa4E-50366375211 (11)C
GRMZM2G077632_P01 3.21Zea mays0488718393 (72)C
GRMZM2G077632_P02 3.21Zea mays0488718393 (72)C
v1_GRMZM2G077632_P02 4a53Zea mays0488718341 (41)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ABC_tran(1) Arf(1) DUF1967(2) DUF3295(1) FeoB_N(1) GTP_EFTU(2) GTP1_OBG(1) MMR_H
TargetP: Chloroplast (Class 1 C0.959; M0.065; S0.025; _0.043)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 681 aa (-cTP 649)
Molecular Weight 75.65 kDA(-cTP 72.08)
PI 5.07(-cTP 4.95)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1535Detail       leaf [A. thaliana] wild-type
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1999Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2000Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2239Detail       seedlings [A. thaliana] total tissue gfs9
2289Detail        [A. thaliana] Clp C1 TRAP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help