PPDB

The Plant Proteome Database

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AT5G18560.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13910.1 11Arabidopsis thaliana3E-347676820 (0)_
AT1G12890.1 11Arabidopsis thaliana4E-297664800 (0)_
AT1G28160.1 11Arabidopsis thaliana2E-286379900 (0)_
Os07g47330.1 7Oryza sativa2E-3821143520 (0)C
Os04g32790.1 7Oryza sativa3E-295984910 (0)C
Os02g32040.1 7Oryza sativa3E-285983890 (0)_
GRMZM2G307119_P01 3.21Zea mays2E-3920543540 (0)C
v1_GRMZM2G307119_P01 4a53Zea mays2E-3920543540 (0)C
Zm00001eb330200_P001 agpv5Zea mays2E-3920543540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) SidC_N(1)
TargetP: Chloroplast (Class 4 C0.742; M0.058; S0.035; _0.491)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 318)
Molecular Weight 38.46 kDA(-cTP 35.09)
PI 6.03(-cTP 5.94)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1873Detail       Total leaf [A. thaliana] Stroma wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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