PPDB

PPDB	The Plant Proteome Database

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AT5G18480.1 plant glycogenin-like starch initiation protein 6

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08990.1 11 Arabidopsis thaliana 3E-32 166 43 63 1 (1) S
AT1G77130.1 11 Arabidopsis thaliana 2E-31 251 33 54 0 (0) _
AT3G18660.3 11 Arabidopsis thaliana 6E-29 177 35 57 0 (0) C
Os02g41520.1 7 Oryza sativa 0 516 60 71 0 (0) S
Os04g43700.1 7 Oryza sativa 6E-105 219 72 81 0 (0) S
Os01g65780.4 7 Oryza sativa 3E-30 169 35 59 0 (0) _
GRMZM2G166903_P01 3.21 Zea mays 0 519 60 73 0 (0) S
Zm00001eb426690_P003 agpv5 Zea mays 0 519 60 73 0 (0) S
v1_GRMZM2G166903_P01 4a53 Zea mays 0 519 60 73 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF835(1) Glyco_transf_8(2) Mannosyl_trans3(1) Phage_holin_3_6(2)
TargetP:	Secreted (Class 2 C0.007; M0.172; S0.951; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	537 aa (-cTP 510)
Molecular Weight	60.01 kDA(-cTP )
PI	9.04(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19334764(plasma membrane (cell culture))
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data