PPDB

PPDB	The Plant Proteome Database

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AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G16420.1 11 Arabidopsis thaliana 2E-58 450 28 51 2 (2) M
AT5G16420.2 11 Arabidopsis thaliana 2E-58 450 28 51 0 (0) M
AT5G16420.4 11 Arabidopsis thaliana 2E-58 450 28 51 0 (0) M
Os02g26890.1 7 Oryza sativa 2E-110 463 39 59 0 (0) C
Os04g40130.1 7 Oryza sativa 3E-50 300 30 55 0 (0) S
Os03g06910.1 7 Oryza sativa 2E-49 418 27 52 0 (0) M
GRMZM2G329293_P01 3.21 Zea mays 1E-112 461 40 59 0 (0) C
v1_GRMZM2G329293_P01 4a53 Zea mays 1E-112 461 40 59 0 (0) C
Zm00001eb279250_P001 agpv5 Zea mays 1E-112 461 40 59 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) ATP13(5) BTAD(4) MRP-S27(5) PPR(11) PPR_1(8) PPR_2(10) PPR_3(5) PPR_lo
TargetP:	Chloroplast (Class 3 C0.839; M0.285; S0.010; _0.072)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	506 aa (-cTP 480)
Molecular Weight	57.29 kDA(-cTP 54.22)
PI	8.91(-cTP 8.75)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data