PPDB

The Plant Proteome Database

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AT5G18450.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G75490.1 11Arabidopsis thaliana2E-387482930 (0)_
AT2G40350.2 11Arabidopsis thaliana2E-368371810 (0)_
AT2G40350.1 11Arabidopsis thaliana2E-368371810 (0)_
Os08g45110.1 7Oryza sativa2E-367678860 (0)_
Os01g07120.2 7Oryza sativa3E-337572850 (0)_
Os01g07120.1 7Oryza sativa4E-338764800 (0)_
Zm00001eb336270_P001 agpv5Zea mays2E-347475860 (0)_
Zm00001eb005650_P001 agpv5Zea mays3E-318170820 (0)_
v1_GRMZM2G419901_P01 4a53Zea mays3E-318170820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 2 C0.228; M0.070; S0.062; _0.914)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 307 aa (-cTP 288)
Molecular Weight 34.23 kDA(-cTP )
PI 6.32(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help