PPDB

The Plant Proteome Database

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AT5G18410.1   transcription activator

Lab Annot. transcription activators
Mapman: 33.99 development.unspecified
Curated Location
TAIR curated location: SCAR complex15296761
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18410.2 11Arabidopsis thaliana01283999915 (9)_
AT5G18410.3 11Arabidopsis thaliana0102510010014 (8)_
Os03g05020.1 7Oryza sativa0916678221 (21)_
Zm00001eb003550_P001 agpv5Zea mays0128972850 (0)_
v1_GRMZM2G170567_P01 4a53Zea mays054373860 (0)S
GRMZM2G170567_P01 3.21Zea mays0543738610 (5)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1394(1) FragX_IP(1) WASH-7_N(2)
TargetP: Cytoplasm (Class 5 C0.223; M0.069; S0.398; _0.526)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 1283 aa (-cTP 1253)
Molecular Weight 145.48 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


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