PPDB

The Plant Proteome Database

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AT5G18390.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65820.1 11Arabidopsis thaliana1E-4043525450 (0)M
AT5G39710.1 11Arabidopsis thaliana6E-3936527480 (0)M
AT1G62930.1 11Arabidopsis thaliana2E-3835227488 (0)M
Os08g41380.1 7Oryza sativa1E-15942951680 (0)M
Os03g40020.1 7Oryza sativa4E-3634327476 (6)C
Os03g55340.1 7Oryza sativa7E-3638127430 (0)_
v1_GRMZM2G388778_P01 4a53Zea mays3E-15842151690 (0)M
Zm00001eb174970_P001 agpv5Zea mays3E-15842151690 (0)M
GRMZM2G388778_P01 3.21Zea mays3E-15842151690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3368(2) Mtf2(3) PPR(9) PPR_1(8) PPR_2(8) PPR_3(6) PPR_long(3)
TargetP: Mitochondria (Class 3 C0.039; M0.603; S0.026; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 459 aa (-cTP 374)
Molecular Weight 51.77 kDA(-cTP )
PI 8.71(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help