PPDB

PPDB	The Plant Proteome Database

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AT5G18260.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G14180.2 11 Arabidopsis thaliana 5E-22 65 58 73 0 (0) S
AT1G14180.1 11 Arabidopsis thaliana 1E-21 65 58 73 0 (0) C
AT4G39140.2 11 Arabidopsis thaliana 7E-14 85 38 61 0 (0) C
Os03g20980.1 7 Oryza sativa 6E-22 122 40 63 0 (0) _
Os10g26610.1 7 Oryza sativa 1E-21 117 41 54 0 (0) C
Os10g26610.2 7 Oryza sativa 1E-21 117 41 54 0 (0) C
Zm00001eb015540_P001 agpv5 Zea mays 1E-20 198 32 47 0 (0) M
GRMZM2G107463_P02 3.21 Zea mays 1E-20 198 32 47 0 (0) M
v1_GRMZM2G107463_P02 4a53 Zea mays 1E-20 198 32 47 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(2) zf-C3HC4_3(2) zf-rbx1(1)
TargetP:	Chloroplast (Class 3 C0.687; M0.116; S0.003; _0.251)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	320 aa (-cTP 259)
Molecular Weight	35.67 kDA(-cTP 28.89)
PI	6.55(-cTP 6.15)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data