PPDB

The Plant Proteome Database

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AT5G18230.1   transcription regulator NOT2/NOT3/NOT5 family protein

Lab Annot. transcription regulator NOT2/NOT3/NOT5 protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18230.2 11Arabidopsis thaliana0845999911 (6)_
AT5G18230.4 11Arabidopsis thaliana086697970 (0)_
AT5G18230.3 11Arabidopsis thaliana081599990 (0)_
Os03g44900.1 7Oryza sativa0892546917 (17)_
Os03g44900.2 7Oryza sativa0892506417 (17)_
Os03g44900.3 7Oryza sativa075148648 (8)C
GRMZM2G340749_P01 3.21Zea mays081050661 (0)_
Zm00001eb052870_P002 agpv5Zea mays088754690 (0)_
Zm00001eb218410_P005 agpv5Zea mays088656690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NOT2_3_5(2) Not3(1)
TargetP: Cytoplasm (Class 2 C0.063; M0.178; S0.110; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 843 aa (-cTP 826)
Molecular Weight 92.95 kDA(-cTP )
PI 5.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
2286Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help