PPDB

The Plant Proteome Database

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AT5G18180.1   H/ACA ribonucleoprotein complex%2C subunit Gar1/Naf1 protein

Lab Annot. glycine-rich protein
Mapman: 27.4 RNA.RNA binding
Curated Location
TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G03920.1 11Arabidopsis thaliana5E-63151747711 (10)M
Os11g37080.1 7Oryza sativa7E-60101859513 (13)M
Zm00001eb114360_P002 agpv5Zea mays2E-5810380920 (0)M
GRMZM6G847892_P02 3.21Zea mays2E-58103809210 (10)M
Zm00001eb200450_P001 agpv5Zea mays3E-5810380930 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Gar1(1)
TargetP: Mitochondria (Class 4 C0.057; M0.672; S0.021; _0.418)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 189 aa (-cTP 178)
Molecular Weight 20.31 kDA(-cTP )
PI 11.73(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
17432890(leaf total membranes)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help