PPDB

The Plant Proteome Database

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AT5G18100.1   copper/zinc superoxide dismutase 3

Lab Annot. copper/zinc superoxide dismutase (CSD3)
Mapman: 21.6 redox.dismutases and catalases
Curated Location peroxisome (Pubmed: 7951448 )

TAIR curated location: peroxisome9765550
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18100.2 11Arabidopsis thaliana6E-951341001007 (5)_
AT1G08830.2 11Arabidopsis thaliana8E-621496173157 (106)_
AT1G08830.1 11Arabidopsis thaliana8E-621496173158 (107)_
Os07g46990.2 7Oryza sativa4E-69150658017 (17)_
Os07g46990.1 7Oryza sativa4E-69150658017 (17)_
Os03g11960.1 7Oryza sativa4E-69163657910 (10)_
GRMZM2G025992_P05 3.21Zea mays2E-68150668119 (18)_
GRMZM2G025992_P04 3.21Zea mays2E-68150668119 (18)_
GRMZM2G025992_P03 3.21Zea mays2E-68150668119 (18)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sod_Cu(1)
TargetP: Cytoplasm (Class 5 C0.069; M0.318; S0.053; _0.445)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 159)
Molecular Weight 16.94 kDA(-cTP )
PI 7.16(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2249Detail       seedlings [A. thaliana] total tissue gfs9
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17951448(peroxisome (leaves))
18998720(SA-induced secreted proteome (cell culture))
17216043(leaf)
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data


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