PPDB

 The Plant Proteome Database

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AT5G18000.1   VERDANDI
Lab Annot.
Mapman: 27.3.41 RNA.regulation of transcription.B3 transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G18000.2 11Arabidopsis thaliana02721001000 (0)_
AT5G18090.1 11Arabidopsis thaliana1E-12930762790 (0)_
AT3G17010.1 11Arabidopsis thaliana3E-8230645630 (0)_
Os04g28000.1 7Oryza sativa2E-0926123420 (0)_
Os03g08620.1 7Oryza sativa2E-0815825470 (0)_
Os03g42410.1 7Oryza sativa4E-0825123440 (0)S
Zm00001eb051340_P001 agpv5Zea mays9E-0827223410 (0)_
Zm00001eb051340_P002 agpv5Zea mays9E-0827223410 (0)_
GRMZM2G088427_P01 3.21Zea mays9E-0827223410 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: B3(2) Ndc1_Nup(1) Presenilin(1)
TargetP: Cytoplasm (Class 3 C0.188; M0.165; S0.074; _0.693)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 307 aa (-cTP 264)
Molecular Weight 35.73 kDA(-cTP )
PI 9.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help