PPDB

The Plant Proteome Database

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AT5G17980.1   C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

Lab Annot. C2 calcium/lipid-binding plant phosphoribosyltransferase protein
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74720.1 11Arabidopsis thaliana077253700 (0)_
AT3G03680.1 11Arabidopsis thaliana0107643610 (0)_
AT4G11610.1 11Arabidopsis thaliana0108041600 (0)_
Os07g07070.1 7Oryza sativa076955700 (0)_
Os04g58720.1 7Oryza sativa0107442610 (0)_
Os01g40480.1 7Oryza sativa079951680 (0)C
Zm00001eb300760_P001 agpv5Zea mays077255700 (0)_
AC200753.3_FGP003 3.21Zea mays077255700 (0)_
v1_AC200753.3_FGP003 4a53Zea mays077255700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C2(4) DUF3292(2) DUF639(3) PRT_C(1) Reticulon(2)
TargetP: Cytoplasm (Class 2 C0.109; M0.097; S0.091; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 1049 aa (-cTP 1018)
Molecular Weight 117.93 kDA(-cTP )
PI 6.03(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help