PPDB

 The Plant Proteome Database

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AT5G17910.1   cardiomyopathy-associated protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17910.3 11Arabidopsis thaliana013421001000 (0)M
AT5G17910.2 11Arabidopsis thaliana0134210010014 (14)M
AT2G29620.4 11Arabidopsis thaliana7E-3013852660 (0)_
Os01g59670.1 7Oryza sativa7E-4532437540 (0)_
Os07g28920.1 7Oryza sativa3E-3524342540 (0)M
Os05g41150.1 7Oryza sativa1E-2754027450 (0)_
Zm00001eb150130_P001 agpv5Zea mays1E-4237436540 (0)M
Zm00001eb150100_P001 agpv5Zea mays1E-4135236540 (0)M
Zm00001eb150100_P002 agpv5Zea mays3E-4135236550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Tropomyosin(1)
TargetP: Mitochondria (Class 3 C0.002; M0.869; S0.028; _0.401)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 1342 aa (-cTP 1286)
Molecular Weight 149.60 kDA(-cTP )
PI 4.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
666Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 1-1)
667Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 2-1)
668Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3-1)
682Detail       leaf [A. thaliana] chloroplast plastoglobulek3 (rep. 2-1)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1515Detail       leaf [A. thaliana] wild-type
1516Detail       leaf [A. thaliana] wild-type
1518Detail       leaf [A. thaliana] wild-type
1524Detail       leaf [A. thaliana] wild-type
1542Detail       leaf [A. thaliana] wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help