PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G17830.1   Plasma-membrane choline transporter family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17830.2 11Arabidopsis thaliana04521001000 (0)_
AT3G04440.2 11Arabidopsis thaliana3E-16644854720 (0)_
AT3G04440.1 11Arabidopsis thaliana9E-16645053720 (0)C
Os07g46240.1 7Oryza sativa2E-4848229440 (0)_
Os03g44840.1 7Oryza sativa5E-4344629460 (0)_
Os03g44840.2 7Oryza sativa8E-3040827450 (0)_
v1_GRMZM2G330453_P01 4a53Zea mays2E-5547029490 (0)_
GRMZM2G330453_P01 3.21Zea mays4E-5547029490 (0)_
Zm00001eb052910_P001 agpv5Zea mays4E-5547029490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Choline_transpo(2)
TargetP: Cytoplasm (Class 2 C0.132; M0.109; S0.007; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 9 TMs
TAT position:
Length 474 aa (-cTP 432)
Molecular Weight 53.12 kDA(-cTP )
PI 8.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help