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AT5G17790.1
zinc finger (Ran-binding) family protein
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| Lab Annot. |
OZ1 (Organelle Zinc finger 1) (previously VAR3 - interacts with NCED4/CCD4??)
Mapman: 27.1.5* RNA.processing.editing |
| Curated Location |
plastid (Pubmed: 15340011 23198870 18431481 25768119 )
TAIR curated location: chloroplast stroma & chloroplast15340011 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF2252(1) Ima1_N(2) zf-RanBP(2) |
| TargetP: |
Chloroplast (Class 4 C0.702; M0.407; S0.008; _0.025) |
| Predotar: |
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| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
758 aa (-cTP 725) (-lTP 618) |
| Molecular Weight |
85.94 kDA(-cTP 82.15)(-lTP 70.29) |
| PI |
8.55(-cTP 7.93)(-lTP 7.932) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1178 | Detail | | | | | | | | leaf [A. thaliana] | co-IP RH3 stroma | clpr2-1 |
| 1179 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | clpr2-1 |
| 1197 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | clpr2-1 |
| 1215 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1752 | Detail | | | | | | | | [A. thaliana] | | ORMM1 |
| 1755 | Detail | | | | | | | | [A. thaliana] | | ORMM1 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
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Comparative Proteomics Data
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