PPDB

PPDB	The Plant Proteome Database

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AT5G17690.1 like heterochromatin protein (LHP1)

Lab Annot.

like heterochromatin protein (LHP1)
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

TAIR curated location: nuclear heterochromatin & euchromatin16361394,16244868

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G17690.3 11 Arabidopsis thaliana 0 452 98 98 0 (0) _
AT5G17690.2 11 Arabidopsis thaliana 0 431 99 100 0 (0) _
Os10g17770.1 7 Oryza sativa 1E-54 360 37 53 0 (0) _
v1_GRMZM2G117100_P01 4a53 Zea mays 1E-51 374 35 48 6 (6) _
GRMZM2G117100_P01 3.21 Zea mays 1E-51 374 35 48 0 (0) _
v1_AC199173.3_FGP006 4a53 Zea mays 7E-37 341 34 46 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC45(1) Chromo(1) Chromo_shadow(2) Mtf2_C(1) NOA36(1) Nop14(1) Sigma70_ner(2)
TargetP:	Cytoplasm (Class 2 C0.134; M0.141; S0.153; _0.754)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	445 aa (-cTP 440)
Molecular Weight	48.64 kDA(-cTP )
PI	5.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data