PPDB

The Plant Proteome Database

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AT5G17640.1   nuclear factor 1 A-type protein (DUF1005)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G10020.1 11Arabidopsis thaliana1E-9346739580 (0)_
AT4G29310.1 11Arabidopsis thaliana2E-9244138560 (0)_
AT1G50040.1 11Arabidopsis thaliana7E-7146935540 (0)C
Os08g06640.1 7Oryza sativa2E-13944050680 (0)M
Os07g04150.1 7Oryza sativa9E-8746041570 (0)_
Os03g56220.1 7Oryza sativa6E-8145240570 (0)_
GRMZM2G113682_P01 3.21Zea mays2E-13444551670 (0)_
v1_GRMZM2G113682_P01 4a53Zea mays2E-13444551670 (0)_
Zm00001eb415270_P002 agpv5Zea mays2E-13444551670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1005(1)
TargetP: Chloroplast (Class 3 C0.638; M0.150; S0.020; _0.173)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 432 aa (-cTP 408)
Molecular Weight 47.58 kDA(-cTP 44.95)
PI 9.05(-cTP 8.89)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help