PPDB

PPDB	The Plant Proteome Database

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AT5G17600.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box superprotein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03550.1 11 Arabidopsis thaliana 3E-110 382 54 64 0 (0) _
AT4G17905.1 11 Arabidopsis thaliana 2E-55 257 39 57 0 (0) _
AT4G17905.2 11 Arabidopsis thaliana 7E-55 257 39 57 0 (0) S
Os02g46600.1 7 Oryza sativa 1E-65 391 40 53 0 (0) _
Os04g50100.1 7 Oryza sativa 5E-61 392 39 51 0 (0) _
Os02g57460.1 7 Oryza sativa 7E-32 247 31 53 0 (0) _
Zm00001eb251210_P001 agpv5 Zea mays 1E-60 401 38 49 0 (0) _
GRMZM2G004480_P01 3.21 Zea mays 1E-60 401 38 49 0 (0) _
v1_GRMZM2G004480_P01 4a53 Zea mays 1E-60 401 38 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_1(1) Prok-RING_4(1) RINGv(1) TMEM171(1) zf-ANAPC11(1) zf-C3
TargetP:	Cytoplasm (Class 2 C0.076; M0.114; S0.020; _0.819)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	362 aa (-cTP 312)
Molecular Weight	39.75 kDA(-cTP )
PI	4.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data