PPDB

 The Plant Proteome Database

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AT5G17570.1   TatD related DNase
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17570.2 11Arabidopsis thaliana03071001000 (0)_
AT3G03500.1 11Arabidopsis thaliana3E-13530762740 (0)S
AT3G03500.3 11Arabidopsis thaliana5E-10319670850 (0)S
Os04g48820.1 7Oryza sativa5E-14030363750 (0)M
Os04g48820.2 7Oryza sativa5E-14030363750 (0)M
Os07g06440.1 7Oryza sativa3E-1230727420 (0)_
Zm00001eb073330_P004 agpv5Zea mays5E-13330361730 (0)M
Zm00001eb073330_P001 agpv5Zea mays5E-13330361730 (0)M
v1_GRMZM2G114131_P01 4a53Zea mays5E-133303617313 (13)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4110(1) TatD_DNase(1)
TargetP: Cytoplasm (Class 4 C0.148; M0.174; S0.151; _0.560)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 293)
Molecular Weight 35.58 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to seeds)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help