PPDB

The Plant Proteome Database

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AT5G17520.1   root cap 1 (RCP1)

Lab Annot. maltose exporter Mex1 (formerly root cap 1 -RCP1)
Mapman: 34.8 transport.metabolite transporters at the envelope membrane
Curated Location envelope-inner-integral (Pubmed: 23198870 14704427 )

TAIR curated location: chloroplast inner membrane15862090,12775770
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G17520.2 11Arabidopsis thaliana0328991000 (0)S
AT5G17523.1 11Arabidopsis thaliana4E-16023096980 (0)C
Os04g51330.1 7Oryza sativa3E-143325688251 (51)C
Zm00001eb071770_P002 agpv5Zea mays3E-14732569820 (0)C
v1_GRMZM2G156356_P02 4a53Zea mays3E-147325698287 (86)C
GRMZM2G156356_P02 3.21Zea mays3E-147325698278 (78)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 7TMR-DISM_7TM(1) DUF81(1) MatE(1) MFS_1(1)
TargetP: Chloroplast (Class 1 C0.940; M0.046; S0.006; _0.083)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 9 TMs
Aramemnon: 9 TMs
TAT position:
Length 415 aa (-cTP 368)
Molecular Weight 45.28 kDA(-cTP 40.43)
PI 9.38(-cTP 9.02)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1745Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
18686298(tonoplast - phosphoproteome (leaves))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help